Result for Job: 100000002

Prediction by cons-PPISP : consensus Protein-Protein Interaction Site Predictor


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The predicted interface residues are (shown as residueID:chainID, separated by comma)

137:A, 138:A, 140:A, 239:A, 240:A, 241:A, 242:A, 243:A, 244:A, 245:A, 275:A

Raw result

Submission name: consPPISPtest 
Job submitted  : Fri Dec 30 14:42:01 EST 2011
Job done       : Fri Dec 30 14:43:46 EST 2011

Prediction by cons-PPISP : consensus Protein-Protein Interaction Site Predictor
Column 1: AA (Amino Acid code)
Column 2: Ch (Chain ID)
Column 3: AA# (Amino Acid number)
Column 4: Score (neural network score)
Column 5: Prediction of whether the residue contacts
	  (P = Positive; N = Negative; - = Burried and not predicted)
*************************************************************************
AA Ch  AA#  Score   Prediction
S  A   94    0.016        N
S  A   95    0.077        N
S  A   96    0.335        N
V  A   97    0.385        N
P  A   98    0.326        N
S  A   99    0.215        N
Q  A  100    0.097        N
K  A  101    0.074        N
T  A  102    0.010        N
Y  A  103    0.100        N
Q  A  104    0.007        N
G  A  105    0.082        N
S  A  106    0.134        N
Y  A  107    0.154        N
G  A  108    0.096        N
F  A  109    0.000        -
R  A  110    0.005        N
L  A  111    0.000        -
G  A  112    0.021        N
F  A  113    0.000        -
L  A  114    0.006        N
H  A  115    0.003        N
S  A  116    0.003        N
G  A  117    0.003        N
T  A  118    0.004        N
A  A  119    0.027        N
K  A  120    0.003        N
S  A  121    0.006        N
V  A  122    0.025        N
T  A  123    0.011        N
C  A  124    0.000        -
T  A  125    0.000        -
Y  A  126    0.012        N
S  A  127    0.000        -
P  A  128    0.005        N
A  A  129    0.007        N
L  A  130    0.019        N
N  A  131    0.034        N
K  A  132    0.009        N
M  A  133    0.000        -
F  A  134    0.000        -
C  A  135    0.000        -
Q  A  136    0.012        N
L  A  137    0.898        P
A  A  138    0.982        P
K  A  139    0.000        -
T  A  140    0.924        P
C  A  141    0.000        -
P  A  142    0.000        -
V  A  143    0.000        -
Q  A  144    0.005        N
L  A  145    0.000        -
W  A  146    0.028        N
V  A  147    0.102        N
D  A  148    0.015        N
S  A  149    0.122        N
T  A  150    0.027        N
P  A  151    0.110        N
P  A  152    0.009        N
P  A  153    0.012        N
G  A  154    0.057        N
T  A  155    0.000        -
R  A  156    0.060        N
V  A  157    0.000        -
R  A  158    0.279        N
A  A  159    0.000        -
M  A  160    0.304        N
A  A  161    0.000        -
I  A  162    0.000        -
Y  A  163    0.000        -
K  A  164    0.008        N
Q  A  165    0.004        N
S  A  166    0.008        N
Q  A  167    0.007        N
H  A  168    0.046        N
M  A  169    0.005        N
T  A  170    0.006        N
E  A  171    0.011        N
V  A  172    0.220        N
V  A  173    0.000        -
R  A  174    0.023        N
R  A  175    0.007        N
C  A  176    0.000        -
P  A  177    0.063        N
H  A  178    0.007        N
H  A  179    0.007        N
E  A  180    0.004        N
R  A  181    0.046        N
C  A  182    0.023        N
S  A  183    0.022        N
D  A  184    0.003        N
S  A  185    0.004        N
D  A  186    0.003        N
G  A  187    0.005        N
L  A  188    0.009        N
A  A  189    0.000        -
P  A  190    0.008        N
P  A  191    0.005        N
Q  A  192    0.052        N
H  A  193    0.000        -
L  A  194    0.000        -
I  A  195    0.000        -
R  A  196    0.083        N
V  A  197    0.000        -
E  A  198    0.102        N
G  A  199    0.074        N
N  A  200    0.029        N
L  A  201    0.024        N
R  A  202    0.104        N
V  A  203    0.000        -
E  A  204    0.020        N
Y  A  205    0.228        N
L  A  206    0.391        N
D  A  207    0.192        N
D  A  208    0.315        N
R  A  209    0.218        N
N  A  210    0.213        N
T  A  211    0.015        N
F  A  212    0.040        N
R  A  213    0.040        N
H  A  214    0.225        N
S  A  215    0.000        -
V  A  216    0.000        -
V  A  217    0.166        N
V  A  218    0.000        -
P  A  219    0.000        -
Y  A  220    0.060        N
E  A  221    0.010        N
P  A  222    0.008        N
P  A  223    0.005        N
E  A  224    0.202        N
V  A  225    0.013        N
G  A  226    0.121        N
S  A  227    0.170        N
D  A  228    0.027        N
C  A  229    0.000        -
T  A  230    0.000        -
T  A  231    0.023        N
I  A  232    0.000        -
H  A  233    0.066        N
Y  A  234    0.000        -
N  A  235    0.000        -
Y  A  236    0.000        -
M  A  237    0.022        N
C  A  238    0.000        -
N  A  239    0.981        P
S  A  240    0.970        P
S  A  241    0.917        P
C  A  242    0.929        P
M  A  243    0.984        P
G  A  244    0.726        P
G  A  245    0.956        P
M  A  246    0.000        -
N  A  247    0.144        N
R  A  248    0.016        N
R  A  249    0.007        N
P  A  250    0.003        N
I  A  251    0.000        -
L  A  252    0.000        -
T  A  253    0.000        -
I  A  254    0.000        -
I  A  255    0.000        -
T  A  256    0.000        -
L  A  257    0.000        -
E  A  258    0.060        N
D  A  259    0.005        N
S  A  260    0.006        N
S  A  261    0.004        N
G  A  262    0.005        N
N  A  263    0.018        N
L  A  264    0.169        N
L  A  265    0.189        N
G  A  266    0.000        -
R  A  267    0.103        N
N  A  268    0.000        -
S  A  269    0.042        N
F  A  270    0.000        -
E  A  271    0.000        -
V  A  272    0.000        -
R  A  273    0.005        N
V  A  274    0.000        -
C  A  275    0.727        P
A  A  276    0.035        N
C  A  277    0.028        N
P  A  278    0.000        -
G  A  279    0.000        -
R  A  280    0.014        N
D  A  281    0.008        N
R  A  282    0.008        N
R  A  283    0.003        N
T  A  284    0.006        N
E  A  285    0.005        N
E  A  286    0.017        N
E  A  287    0.004        N
N  A  288    0.003        N
L  A  289    0.017        N
R  A  290    0.004        N
K  A  291    0.012        N
K  A  292    0.003        N
G  A  293    0.004        N
E  A  294    0.003        N
P  A  295    0.004        N
H  A  296    0.012        N
H  A  297    0.005        N
------------------------------------------------------------------------
The positive predictions above were from a clustering process.
Other clusters may have been filtered. Filtered clusters, if any,
are appended here for your information.
Cluster 1 (confid=53)
 97  98  96  99  95  94 
Cluster 2 (confid=53)
239 242 241 243 240 137 245 138 244 140 275 
Cluster 3 (confid=43)
206 213 217 205 211 158 204 202 207 212 214 192 160 210 208 209 
Cluster 4 (confid=27)
107 106 105 103 
TOTAL CLUSTERS 4, min_confid=8
FILTERED CLUSTERS: 3 4 1 4 
*************************************************************************
If there is no prediction printed above this asterisks line, you should 
go back and check your submission input. The structure must be in 
PDB format and chain IDs of protein must be entered.

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